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        MultiQC: Summarize analysis results for multiple tools and samples in a single report
        Philip Ewels, Måns Magnusson, Sverker Lundin and Max Käller
        Bioinformatics (2016)
        doi: 10.1093/bioinformatics/btw354
        PMID: 27312411

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        About MultiQC

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        MultiQC is published in Bioinformatics:

        MultiQC: Summarize analysis results for multiple tools and samples in a single report
        Philip Ewels, Måns Magnusson, Sverker Lundin and Max Käller
        Bioinformatics (2016)
        doi: 10.1093/bioinformatics/btw354
        PMID: 27312411

        A modular tool to aggregate results from bioinformatics analyses across many samples into a single report.

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        Report generated on 2017-11-17, 13:57 based on data in:


        General Statistics

        Showing 89/89 rows and 10/17 columns.
        Sample NameAvg. GCInsert Size≥ 30XCoverage% AlignedN50 (Kbp)Length (Mbp)OrganismContigsCDS
        ES-0001a
        58%
        459bp
        99.6%
        90.0X
        99.3%
        250.8bp
        3.3bp
        Brucella canis
        32.0
        3092
        ES-0001b
        58%
        376bp
        99.8%
        181.0X
        99.0%
        250.9bp
        3.3bp
        Brucella canis
        35.0
        3089
        ES-0001c
        59%
        470bp
        99.7%
        136.0X
        97.6%
        367.7bp
        3.3bp
        Brucella canis
        27.0
        3092
        ES-0002a
        57%
        453bp
        99.8%
        102.0X
        99.1%
        256.1bp
        3.3bp
        Brucella melitensis
        26.0
        3123
        ES-0002b
        58%
        369bp
        99.8%
        137.0X
        98.2%
        221.8bp
        3.3bp
        Brucella melitensis
        33.0
        3122
        ES-0002c
        58%
        541bp
        99.4%
        81.0X
        98.2%
        246.8bp
        3.3bp
        Brucella melitensis
        24.0
        3123
        ES-0003a
        58%
        451bp
        96.1%
        52.0X
        99.2%
        189.7bp
        3.3bp
        Brucella melitensis
        56.0
        3141
        ES-0003b
        58%
        390bp
        99.8%
        154.0X
        99.0%
        251.1bp
        3.3bp
        Brucella melitensis
        33.0
        3128
        ES-0003c
        58%
        401bp
        99.9%
        225.0X
        99.0%
        251.1bp
        3.3bp
        Brucella melitensis
        43.0
        3130
        ES-0004a
        57%
        493bp
        66.2%
        34.0X
        98.8%
        223.4bp
        3.3bp
        Brucella melitensis
        36.0
        3138
        ES-0004b
        58%
        386bp
        99.8%
        144.0X
        99.0%
        383.3bp
        3.3bp
        Brucella melitensis
        32.0
        3143
        ES-0004c
        58%
        477bp
        99.7%
        146.0X
        98.8%
        383.3bp
        3.3bp
        Brucella melitensis
        30.0
        3142
        ES-0005a
        57%
        449bp
        99.6%
        75.0X
        99.2%
        207.8bp
        3.3bp
        Brucella suis
        53.0
        3073
        ES-0005b
        58%
        399bp
        99.8%
        144.0X
        99.1%
        251.7bp
        3.3bp
        Brucella suis
        38.0
        3067
        ES-0005c
        58%
        458bp
        99.8%
        127.0X
        98.7%
        334.6bp
        3.3bp
        Brucella suis
        33.0
        3070
        ES-0006a
        58%
        386bp
        99.9%
        165.0X
        98.6%
        170.3bp
        3.3bp
        Brucella suis
        37.0
        3120
        ES-0006b
        58%
        387bp
        99.8%
        148.0X
        98.9%
        140.1bp
        3.3bp
        Brucella suis
        37.0
        3127
        ES-0006c
        58%
        413bp
        99.9%
        157.0X
        99.0%
        170.3bp
        3.3bp
        Brucella suis
        32.0
        3124
        ES-0007a
        58%
        472bp
        97.0%
        54.0X
        99.1%
        220.9bp
        3.3bp
        Brucella suis
        46.0
        3101
        ES-0007b
        58%
        375bp
        99.9%
        203.0X
        99.0%
        252.2bp
        3.3bp
        Brucella suis
        30.0
        3086
        ES-0007c
        59%
        419bp
        99.8%
        139.0X
        97.0%
        300.4bp
        3.3bp
        Brucella suis
        29.0
        3083
        ES-0008a
        57%
        455bp
        99.6%
        93.0X
        99.3%
        300.2bp
        3.3bp
        Brucella suis
        31.0
        3091
        ES-0008b
        58%
        418bp
        99.5%
        106.0X
        98.9%
        298.1bp
        3.3bp
        Brucella suis
        34.0
        3083
        ES-0008c
        58%
        400bp
        99.9%
        198.0X
        99.1%
        300.1bp
        3.3bp
        Brucella suis
        29.0
        3083
        ES-0009a
        57%
        456bp
        99.6%
        86.0X
        99.2%
        252.8bp
        3.3bp
        Brucella abortus
        34.0
        3117
        ES-0009b
        58%
        387bp
        99.8%
        150.0X
        99.0%
        309.0bp
        3.3bp
        Brucella abortus
        30.0
        3113
        ES-0009c
        59%
        451bp
        99.5%
        93.0X
        97.6%
        308.9bp
        3.3bp
        Brucella abortus
        32.0
        3116
        ES-0010a
        57%
        438bp
        99.7%
        106.0X
        99.4%
        316.8bp
        3.3bp
        Brucella abortus
        30.0
        3107
        ES-0010b
        58%
        400bp
        99.8%
        142.0X
        99.0%
        316.9bp
        3.3bp
        Brucella abortus
        26.0
        3099
        ES-0010c
        59%
        515bp
        99.3%
        75.0X
        96.3%
        251.7bp
        3.3bp
        Brucella abortus
        31.0
        3093
        ES-0011a
        57%
        476bp
        99.6%
        103.0X
        99.2%
        383.4bp
        3.3bp
        Brucella abortus
        31.0
        3122
        ES-0011b
        58%
        431bp
        99.5%
        125.0X
        98.9%
        322.7bp
        3.3bp
        Brucella abortus
        29.0
        3114
        ES-0011c
        58%
        401bp
        46.1%
        29.0X
        97.3%
        167.7bp
        3.3bp
        Brucella abortus
        45.0
        3116
        ES-0012a
        57%
        521bp
        95.2%
        52.0X
        98.8%
        251.6bp
        3.3bp
        Brucella abortus
        39.0
        3109
        ES-0012b
        58%
        428bp
        99.6%
        106.0X
        98.9%
        251.7bp
        3.3bp
        Brucella abortus
        30.0
        3108
        ES-0012c
        58%
        368bp
        100.0%
        198.0X
        98.0%
        367.7bp
        3.3bp
        Brucella abortus
        32.0
        3109
        ES-0013a
        58%
        415bp
        99.7%
        133.0X
        98.8%
        347.6bp
        3.3bp
        Brucella abortus
        30.0
        3096
        ES-0013b
        58%
        403bp
        99.8%
        135.0X
        98.7%
        216.9bp
        3.3bp
        Brucella abortus
        31.0
        3095
        ES-0013c
        59%
        388bp
        99.8%
        111.0X
        96.8%
        252.9bp
        3.3bp
        Brucella abortus
        31.0
        3094
        ES-0014a
        57%
        468bp
        97.6%
        59.0X
        98.9%
        383.5bp
        3.3bp
        Brucella abortus
        29.0
        3098
        ES-0014b
        58%
        389bp
        99.8%
        128.0X
        98.8%
        252.8bp
        3.3bp
        Brucella abortus
        30.0
        3099
        ES-0014c
        58%
        522bp
        99.6%
        107.0X
        98.1%
        252.8bp
        3.3bp
        Brucella abortus
        29.0
        3097
        ES-0015a
        57%
        443bp
        99.9%
        125.0X
        99.3%
        383.5bp
        3.3bp
        Brucella abortus
        33.0
        3112
        ES-0015b
        58%
        394bp
        99.9%
        170.0X
        99.0%
        347.5bp
        3.3bp
        Brucella abortus
        30.0
        3110
        ES-0015c
        59%
        467bp
        99.4%
        88.0X
        95.4%
        211.7bp
        3.3bp
        Brucella abortus
        37.0
        3104
        ES-0016a
        57%
        480bp
        98.4%
        63.0X
        99.3%
        316.7bp
        3.3bp
        Brucella abortus
        31.0
        3108
        ES-0016b
        58%
        381bp
        99.9%
        135.0X
        98.9%
        367.7bp
        3.3bp
        Brucella abortus
        27.0
        3105
        ES-0016c
        58%
        416bp
        99.8%
        146.0X
        99.0%
        251.7bp
        3.3bp
        Brucella abortus
        30.0
        3108
        ES-0017a
        57%
        465bp
        99.0%
        68.0X
        99.2%
        317.1bp
        3.3bp
        Brucella abortus
        30.0
        3123
        ES-0017b
        58%
        436bp
        99.7%
        112.0X
        98.9%
        383.4bp
        3.3bp
        Brucella abortus
        25.0
        3122
        ES-0017c
        59%
        436bp
        98.8%
        68.0X
        95.8%
        187.1bp
        3.3bp
        Brucella abortus
        81.0
        3120
        ES-0018a
        58%
        443bp
        89.7%
        68.0X
        85.0%
        197.5bp
        3.4bp
        Brucella inopinata
        56.0
        3160
        ES-0018b
        58%
        410bp
        90.9%
        97.0X
        84.6%
        159.2bp
        3.4bp
        Brucella inopinata
        59.0
        3153
        ES-0018c
        58%
        450bp
        90.5%
        89.0X
        85.6%
        155.7bp
        3.4bp
        Brucella inopinata
        61.0
        3153
        ES-0019a
        58%
        506bp
        0.0%
        6.0X
        86.3%
        10.4bp
        3.3bp
        Brucella inopinata-like
        506.0
        3268
        ES-0019b
        58%
        447bp
        89.0%
        98.0X
        88.4%
        335.0bp
        3.3bp
        Brucella inopinata-like
        32.0
        3089
        ES-0019c
        58%
        345bp
        89.3%
        138.0X
        87.7%
        368.9bp
        3.3bp
        Brucella inopinata-like
        42.0
        3084
        ES-0020a
        58%
        392bp
        99.8%
        173.0X
        98.7%
        263.8bp
        3.3bp
        Brucella melitensis
        40.0
        3152
        ES-0020b
        58%
        383bp
        99.9%
        154.0X
        98.7%
        251.5bp
        3.3bp
        Brucella melitensis
        27.0
        3125
        ES-0020c
        58%
        427bp
        99.8%
        161.0X
        98.9%
        256.2bp
        3.3bp
        Brucella melitensis
        27.0
        3128
        ES-0021a
        57%
        480bp
        99.3%
        70.0X
        99.0%
        234.2bp
        3.3bp
        Brucella microti
        37.0
        3072
        ES-0021b
        58%
        392bp
        99.9%
        160.0X
        98.9%
        234.2bp
        3.3bp
        Brucella microti
        37.0
        3070
        ES-0021c
        58%
        463bp
        99.9%
        107.0X
        98.5%
        234.2bp
        3.3bp
        Brucella microti
        40.0
        3069
        ES-0022a
        57%
        457bp
        98.8%
        76.0X
        97.9%
        465.1bp
        3.3bp
        Brucella neotomae
        30.0
        3135
        ES-0022b
        58%
        415bp
        99.3%
        130.0X
        97.7%
        252.7bp
        3.3bp
        Brucella neotomae
        27.0
        3135
        ES-0022c
        58%
        548bp
        98.9%
        86.0X
        96.9%
        383.3bp
        3.3bp
        Brucella neotomae
        32.0
        3129
        ES-0023a
        57%
        447bp
        98.7%
        91.0X
        99.4%
        155.5bp
        3.4bp
        Brucella pyxicephali
        50.0
        3103
        ES-0023b
        57%
        476bp
        42.1%
        27.0X
        98.9%
        129.9bp
        3.4bp
        Brucella pyxicephali
        64.0
        3095
        ES-0023c
        58%
        558bp
        95.7%
        52.0X
        97.7%
        154.0bp
        3.4bp
        Brucella pyxicephali
        49.0
        3092
        ES-0024a
        57%
        474bp
        93.4%
        48.0X
        98.1%
        86.8bp
        3.3bp
        Brucella ceti
        103.0
        3104
        ES-0024b
        58%
        490bp
        10.9%
        18.0X
        97.8%
        49.2bp
        3.3bp
        Brucella ceti
        161.0
        3099
        ES-0024c
        58%
        493bp
        98.7%
        123.0X
        97.5%
        85.9bp
        3.3bp
        Brucella ceti
        96.0
        3088
        ES-0025a
        57%
        473bp
        99.3%
        71.0X
        99.1%
        363.7bp
        3.3bp
        Brucella suis
        29.0
        3082
        ES-0025b
        57%
        455bp
        99.3%
        76.0X
        99.1%
        222.5bp
        3.3bp
        Brucella suis
        40.0
        3080
        ES-0025c
        59%
        415bp
        99.7%
        103.0X
        95.9%
        283.0bp
        3.3bp
        Brucella suis
        33.0
        3074
        ES-0026a
        57%
        472bp
        97.2%
        57.0X
        97.0%
        187.5bp
        3.3bp
        Brucella papionis
        46.0
        3149
        ES-0026b
        58%
        439bp
        96.4%
        54.0X
        97.0%
        251.3bp
        3.3bp
        Brucella papionis
        50.0
        3141
        ES-0026c
        58%
        488bp
        99.2%
        141.0X
        96.7%
        209.1bp
        3.3bp
        Brucella papionis
        49.0
        3134
        ES-0027a
        58%
        501bp
        89.3%
        71.0X
        90.7%
        169.1bp
        3.1bp
        Brucella rodentia
        59.0
        2927
        ES-0027b
        58%
        483bp
        88.1%
        56.0X
        90.2%
        176.2bp
        3.1bp
        Brucella rodentia
        62.0
        2936
        ES-0027c
        58%
        384bp
        90.8%
        221.0X
        91.1%
        239.6bp
        3.1bp
        Brucella rodentia
        60.0
        2919
        ES-0028a
        57%
        458bp
        97.1%
        76.0X
        98.2%
        153.8bp
        3.3bp
        Brucella ceti
        73.0
        3083
        ES-0028b
        57%
        469bp
        96.0%
        60.0X
        98.0%
        128.5bp
        3.3bp
        Brucella ceti
        78.0
        3083
        ES-0028c
        59%
        463bp
        97.2%
        86.0X
        94.9%
        116.4bp
        3.3bp
        Brucella ceti
        75.0
        3074
        ES-0132a
        58%
        387bp
        99.6%
        88.0X
        99.1%
        108.7bp
        3.4bp
        Brucella pinnipedialis
        69.0
        3141
        ES-0132b
        58%
        414bp
        99.9%
        124.0X
        98.7%
        114.4bp
        3.4bp
        Brucella pinnipedialis
        66.0
        3146
        ES-0133a
        58%
        466bp
        99.9%
        115.0X
        98.6%
        191.0bp
        3.3bp
        Brucella microti
        38.0
        3072
        ES-0133b
        58%
        421bp
        99.7%
        138.0X
        98.8%
        34.4bp
        3.1bp
        Brucella vulpis
        185.0
        3056
        ES-0133c
        58%
        591bp
        99.3%
        62.0X
        98.2%
        253.4bp
        3.3bp
        Brucella microti
        36.0
        3074

        QualiMap

        QualiMap is a platform-independent application to facilitate the quality control of alignment sequencing data and its derivatives like feature counts.

        Coverage histogram

        loading..

        Cumulative coverage genome fraction

        loading..

        Insert size histogram

        loading..

        GC content distribution

        loading..

        QUAST

        QUAST is a quality assessment tool for genome assemblies, written by the Center for Algorithmic Biotechnology.

        Assembly Statistics

        Showing 89/89 rows and 10/10 columns.
        Sample NameN50 (Kbp)N75 (Kbp)L50 (k)L75 (k)Largest contig (Kbp)Length (Mbp)MisassembliesMismatches/100kbpIndels/100kbpGenome Fraction
        ES-0001a
        250.8bp
        153.8bp
        0.0
        0.0
        470.9bp
        3.3bp
        0.0
        0.91
        0.64
        99.4%
        ES-0001b
        250.9bp
        156.2bp
        0.0
        0.0
        456.7bp
        3.3bp
        0.0
        0.58
        0.36
        99.4%
        ES-0001c
        367.7bp
        190.6bp
        0.0
        0.0
        471.0bp
        3.3bp
        0.0
        0.70
        0.67
        99.4%
        ES-0002a
        256.1bp
        221.7bp
        0.0
        0.0
        462.5bp
        3.3bp
        1.0
        0.76
        1.10
        99.4%
        ES-0002b
        221.8bp
        170.3bp
        0.0
        0.0
        462.6bp
        3.3bp
        0.0
        1.59
        1.04
        99.4%
        ES-0002c
        246.8bp
        170.3bp
        0.0
        0.0
        762.0bp
        3.3bp
        1.0
        0.64
        1.25
        99.4%
        ES-0003a
        189.7bp
        83.9bp
        0.0
        0.0
        291.4bp
        3.3bp
        2.0
        8.30
        1.64
        99.3%
        ES-0003b
        251.1bp
        154.4bp
        0.0
        0.0
        475.4bp
        3.3bp
        1.0
        8.82
        2.04
        99.3%
        ES-0003c
        251.1bp
        154.4bp
        0.0
        0.0
        462.2bp
        3.3bp
        0.0
        8.24
        1.76
        99.3%
        ES-0004a
        223.4bp
        133.3bp
        0.0
        0.0
        460.0bp
        3.3bp
        0.0
        1.03
        0.64
        99.4%
        ES-0004b
        383.3bp
        135.9bp
        0.0
        0.0
        460.0bp
        3.3bp
        1.0
        0.76
        0.58
        99.3%
        ES-0004c
        383.3bp
        170.2bp
        0.0
        0.0
        460.0bp
        3.3bp
        0.0
        0.67
        0.67
        99.4%
        ES-0005a
        207.8bp
        139.4bp
        0.0
        0.0
        522.5bp
        3.3bp
        0.0
        1.91
        0.30
        99.3%
        ES-0005b
        251.7bp
        174.7bp
        0.0
        0.0
        463.7bp
        3.3bp
        0.0
        2.00
        0.36
        99.3%
        ES-0005c
        334.6bp
        180.3bp
        0.0
        0.0
        391.1bp
        3.3bp
        2.0
        1.88
        0.33
        99.3%
        ES-0006a
        170.3bp
        135.9bp
        0.0
        0.0
        459.1bp
        3.3bp
        0.0
        0.21
        0.45
        99.3%
        ES-0006b
        140.1bp
        124.1bp
        0.0
        0.0
        384.1bp
        3.3bp
        0.0
        0.85
        0.21
        99.3%
        ES-0006c
        170.3bp
        135.9bp
        0.0
        0.0
        459.1bp
        3.3bp
        0.0
        0.27
        0.33
        99.3%
        ES-0007a
        220.9bp
        118.7bp
        0.0
        0.0
        473.1bp
        3.3bp
        0.0
        0.52
        0.58
        99.3%
        ES-0007b
        252.2bp
        156.1bp
        0.0
        0.0
        473.2bp
        3.3bp
        0.0
        0.43
        0.61
        99.3%
        ES-0007c
        300.4bp
        163.1bp
        0.0
        0.0
        473.2bp
        3.3bp
        0.0
        0.30
        0.52
        99.3%
        ES-0008a
        300.2bp
        190.6bp
        0.0
        0.0
        470.8bp
        3.3bp
        0.0
        0.27
        0.39
        99.4%
        ES-0008b
        298.1bp
        156.2bp
        0.0
        0.0
        437.2bp
        3.3bp
        2.0
        0.30
        0.33
        99.3%
        ES-0008c
        300.1bp
        190.6bp
        0.0
        0.0
        456.6bp
        3.3bp
        0.0
        0.58
        0.43
        99.4%
        ES-0009a
        252.8bp
        141.2bp
        0.0
        0.0
        462.5bp
        3.3bp
        0.0
        6.74
        1.72
        99.3%
        ES-0009b
        309.0bp
        155.6bp
        0.0
        0.0
        461.8bp
        3.3bp
        1.0
        5.39
        1.62
        99.3%
        ES-0009c
        308.9bp
        226.8bp
        0.0
        0.0
        383.4bp
        3.3bp
        1.0
        6.19
        1.75
        99.3%
        ES-0010a
        316.8bp
        190.2bp
        0.0
        0.0
        600.2bp
        3.3bp
        0.0
        1.23
        0.28
        99.4%
        ES-0010b
        316.9bp
        190.2bp
        0.0
        0.0
        630.2bp
        3.3bp
        0.0
        0.80
        0.31
        99.4%
        ES-0010c
        251.7bp
        155.3bp
        0.0
        0.0
        475.0bp
        3.3bp
        0.0
        1.72
        0.18
        99.4%
        ES-0011a
        383.4bp
        169.9bp
        0.0
        0.0
        544.4bp
        3.3bp
        0.0
        6.19
        1.78
        99.3%
        ES-0011b
        322.7bp
        147.4bp
        0.0
        0.0
        626.4bp
        3.3bp
        1.0
        6.22
        1.84
        99.3%
        ES-0011c
        167.7bp
        102.9bp
        0.0
        0.0
        347.6bp
        3.3bp
        0.0
        6.74
        1.87
        99.3%
        ES-0012a
        251.6bp
        137.8bp
        0.0
        0.0
        478.6bp
        3.3bp
        0.0
        0.77
        0.37
        99.4%
        ES-0012b
        251.7bp
        190.3bp
        0.0
        0.0
        631.9bp
        3.3bp
        0.0
        0.55
        0.43
        99.4%
        ES-0012c
        367.7bp
        222.3bp
        0.0
        0.0
        631.9bp
        3.3bp
        0.0
        0.40
        0.37
        99.4%
        ES-0013a
        347.6bp
        190.2bp
        0.0
        0.0
        630.2bp
        3.3bp
        0.0
        1.14
        0.95
        99.4%
        ES-0013b
        216.9bp
        138.2bp
        0.0
        0.0
        630.2bp
        3.3bp
        0.0
        1.44
        0.92
        99.4%
        ES-0013c
        252.9bp
        156.7bp
        0.0
        0.0
        630.2bp
        3.3bp
        0.0
        2.33
        0.80
        99.3%
        ES-0014a
        383.5bp
        190.2bp
        0.0
        0.0
        847.7bp
        3.3bp
        2.0
        7.01
        1.11
        99.5%
        ES-0014b
        252.8bp
        190.2bp
        0.0
        0.0
        630.3bp
        3.3bp
        2.0
        7.78
        1.26
        99.5%
        ES-0014c
        252.8bp
        216.9bp
        0.0
        0.0
        630.3bp
        3.3bp
        2.0
        6.55
        1.11
        99.5%
        ES-0015a
        383.5bp
        155.7bp
        0.0
        0.0
        848.7bp
        3.3bp
        0.0
        1.01
        0.18
        99.4%
        ES-0015b
        347.5bp
        155.7bp
        0.0
        0.0
        631.2bp
        3.3bp
        0.0
        1.35
        0.15
        99.4%
        ES-0015c
        211.7bp
        138.3bp
        0.0
        0.0
        631.2bp
        3.3bp
        0.0
        1.07
        0.37
        99.4%
        ES-0016a
        316.7bp
        137.9bp
        0.0
        0.0
        707.3bp
        3.3bp
        0.0
        0.67
        0.31
        99.4%
        ES-0016b
        367.7bp
        222.3bp
        0.0
        0.0
        631.8bp
        3.3bp
        0.0
        0.77
        0.40
        99.4%
        ES-0016c
        251.7bp
        139.6bp
        0.0
        0.0
        631.9bp
        3.3bp
        0.0
        1.07
        0.46
        99.4%
        ES-0017a
        317.1bp
        223.4bp
        0.0
        0.0
        619.8bp
        3.3bp
        2.0
        6.28
        1.81
        99.3%
        ES-0017b
        383.4bp
        251.5bp
        0.0
        0.0
        619.6bp
        3.3bp
        2.0
        6.53
        1.81
        99.3%
        ES-0017c
        187.1bp
        135.6bp
        0.0
        0.0
        383.5bp
        3.3bp
        0.0
        33.81
        3.68
        99.3%
        ES-0018a
        197.5bp
        115.5bp
        0.0
        0.0
        422.3bp
        3.4bp
        57.0
        1875.98
        51.36
        90.6%
        ES-0018b
        159.2bp
        101.2bp
        0.0
        0.0
        473.9bp
        3.4bp
        58.0
        1876.42
        50.97
        90.6%
        ES-0018c
        155.7bp
        85.9bp
        0.0
        0.0
        376.8bp
        3.4bp
        56.0
        1875.44
        50.86
        90.6%
        ES-0019a
        10.4bp
        6.0bp
        0.1
        0.2
        48.1bp
        3.3bp
        56.0
        1771.08
        42.79
        86.9%
        ES-0019b
        335.0bp
        233.2bp
        0.0
        0.0
        496.0bp
        3.3bp
        75.0
        1756.79
        42.63
        88.7%
        ES-0019c
        368.9bp
        151.0bp
        0.0
        0.0
        496.0bp
        3.3bp
        72.0
        1756.45
        42.33
        88.7%
        ES-0020a
        263.8bp
        194.4bp
        0.0
        0.0
        390.6bp
        3.3bp
        1.0
        7.42
        2.17
        99.4%
        ES-0020b
        251.5bp
        194.4bp
        0.0
        0.0
        462.5bp
        3.3bp
        1.0
        5.77
        1.44
        99.4%
        ES-0020c
        256.2bp
        161.9bp
        0.0
        0.0
        462.5bp
        3.3bp
        2.0
        6.14
        1.50
        99.4%
        ES-0021a
        234.2bp
        170.5bp
        0.0
        0.0
        340.4bp
        3.3bp
        1.0
        1.93
        0.69
        99.3%
        ES-0021b
        234.2bp
        118.5bp
        0.0
        0.0
        631.2bp
        3.3bp
        0.0
        2.05
        0.72
        99.3%
        ES-0021c
        234.2bp
        167.5bp
        0.0
        0.0
        460.5bp
        3.3bp
        0.0
        1.63
        0.72
        99.3%
        ES-0022a
        465.1bp
        383.3bp
        0.0
        0.0
        747.3bp
        3.3bp
        13.0
        141.70
        12.77
        98.8%
        ES-0022b
        252.7bp
        212.2bp
        0.0
        0.0
        921.6bp
        3.3bp
        17.0
        141.66
        12.74
        98.8%
        ES-0022c
        383.3bp
        186.1bp
        0.0
        0.0
        626.3bp
        3.3bp
        10.0
        141.35
        12.68
        98.8%
        ES-0023a
        155.5bp
        119.2bp
        0.0
        0.0
        689.9bp
        3.4bp
        0.0
        3.02
        7.38
        97.5%
        ES-0023b
        129.9bp
        70.5bp
        0.0
        0.0
        375.2bp
        3.4bp
        0.0
        3.14
        7.47
        97.5%
        ES-0023c
        154.0bp
        102.8bp
        0.0
        0.0
        689.9bp
        3.4bp
        1.0
        2.87
        8.45
        97.5%
        ES-0024a
        86.8bp
        50.6bp
        0.0
        0.0
        251.7bp
        3.3bp
        16.0
        172.38
        15.22
        98.8%
        ES-0024b
        49.2bp
        25.2bp
        0.0
        0.0
        189.2bp
        3.3bp
        15.0
        174.75
        15.31
        98.6%
        ES-0024c
        85.9bp
        50.6bp
        0.0
        0.0
        251.7bp
        3.3bp
        14.0
        172.16
        15.25
        98.8%
        ES-0025a
        363.7bp
        156.2bp
        0.0
        0.0
        623.8bp
        3.3bp
        2.0
        0.40
        0.85
        99.4%
        ES-0025b
        222.5bp
        117.3bp
        0.0
        0.0
        658.1bp
        3.3bp
        0.0
        0.18
        1.07
        99.3%
        ES-0025c
        283.0bp
        136.8bp
        0.0
        0.0
        390.9bp
        3.3bp
        0.0
        0.52
        0.67
        99.2%
        ES-0026a
        187.5bp
        122.6bp
        0.0
        0.0
        463.5bp
        3.3bp
        8.0
        125.40
        12.22
        98.8%
        ES-0026b
        251.3bp
        142.4bp
        0.0
        0.0
        406.8bp
        3.3bp
        9.0
        123.89
        12.26
        98.8%
        ES-0026c
        209.1bp
        116.6bp
        0.0
        0.0
        391.1bp
        3.3bp
        7.0
        125.09
        12.14
        98.8%
        ES-0027a
        169.1bp
        99.8bp
        0.0
        0.0
        362.1bp
        3.1bp
        35.0
        1875.82
        51.58
        90.0%
        ES-0027b
        176.2bp
        96.8bp
        0.0
        0.0
        440.2bp
        3.1bp
        35.0
        1876.48
        51.69
        90.0%
        ES-0027c
        239.6bp
        136.3bp
        0.0
        0.0
        579.2bp
        3.1bp
        35.0
        1875.39
        51.11
        90.0%
        ES-0028a
        153.8bp
        105.1bp
        0.0
        0.0
        292.2bp
        3.3bp
        11.0
        51.07
        7.22
        96.6%
        ES-0028b
        128.5bp
        89.7bp
        0.0
        0.0
        292.2bp
        3.3bp
        11.0
        52.29
        7.37
        96.7%
        ES-0028c
        116.4bp
        76.1bp
        0.0
        0.0
        226.7bp
        3.3bp
        10.0
        51.06
        7.33
        96.7%
        ES-0132a
        108.7bp
        80.0bp
        0.0
        0.0
        241.5bp
        3.4bp
        1.0
        0.39
        0.59
        98.9%
        ES-0132b
        114.4bp
        91.0bp
        0.0
        0.0
        356.7bp
        3.4bp
        0.0
        0.42
        0.65
        99.0%
        ES-0133a
        191.0bp
        155.3bp
        0.0
        0.0
        627.3bp
        3.3bp
        1.0
        1.72
        1.27
        99.3%
        ES-0133b
        34.4bp
        20.4bp
        0.0
        0.1
        115.8bp
        3.1bp
        2.0
        0.19
        0.96
        96.8%
        ES-0133c
        253.4bp
        118.5bp
        0.0
        0.0
        667.6bp
        3.3bp
        1.0
        1.45
        1.30
        99.3%

        Number of Contigs

        This plot shows the number of contigs found for each assembly, broken down by length.

        loading..

        Prokka

        Prokka is a software tool for the rapid annotation of prokaryotic genomes.

        Showing 89/89 rows and 5/5 columns.
        Sample NameOrganism# contigs# bases# CDS# tRNA
        ES-0001a
        Brucella canis
        32
        3296796
        3092
        54
        ES-0001b
        Brucella canis
        35
        3294348
        3089
        54
        ES-0001c
        Brucella canis
        27
        3294365
        3092
        54
        ES-0002a
        Brucella melitensis
        26
        3277810
        3123
        53
        ES-0002b
        Brucella melitensis
        33
        3277743
        3122
        53
        ES-0002c
        Brucella melitensis
        24
        3276496
        3123
        53
        ES-0003a
        Brucella melitensis
        56
        3293903
        3141
        54
        ES-0003b
        Brucella melitensis
        33
        3292219
        3128
        54
        ES-0003c
        Brucella melitensis
        43
        3292550
        3130
        54
        ES-0004a
        Brucella melitensis
        36
        3293076
        3138
        54
        ES-0004b
        Brucella melitensis
        32
        3292236
        3143
        54
        ES-0004c
        Brucella melitensis
        30
        3291984
        3142
        54
        ES-0005a
        Brucella suis
        53
        3307956
        3073
        54
        ES-0005b
        Brucella suis
        38
        3300252
        3067
        54
        ES-0005c
        Brucella suis
        33
        3301008
        3070
        54
        ES-0006a
        Brucella suis
        37
        3303141
        3120
        53
        ES-0006b
        Brucella suis
        37
        3302984
        3127
        53
        ES-0006c
        Brucella suis
        32
        3302826
        3124
        53
        ES-0007a
        Brucella suis
        46
        3304407
        3101
        54
        ES-0007b
        Brucella suis
        30
        3295334
        3086
        54
        ES-0007c
        Brucella suis
        29
        3295717
        3083
        54
        ES-0008a
        Brucella suis
        31
        3296937
        3091
        54
        ES-0008b
        Brucella suis
        34
        3294324
        3083
        54
        ES-0008c
        Brucella suis
        29
        3295046
        3083
        54
        ES-0009a
        Brucella abortus
        34
        3271592
        3117
        54
        ES-0009b
        Brucella abortus
        30
        3265700
        3113
        54
        ES-0009c
        Brucella abortus
        32
        3265640
        3116
        54
        ES-0010a
        Brucella abortus
        30
        3270657
        3107
        54
        ES-0010b
        Brucella abortus
        26
        3261142
        3099
        54
        ES-0010c
        Brucella abortus
        31
        3261772
        3093
        54
        ES-0011a
        Brucella abortus
        31
        3269872
        3122
        54
        ES-0011b
        Brucella abortus
        29
        3265262
        3114
        54
        ES-0011c
        Brucella abortus
        45
        3266319
        3116
        54
        ES-0012a
        Brucella abortus
        39
        3276646
        3109
        52
        ES-0012b
        Brucella abortus
        30
        3269849
        3108
        52
        ES-0012c
        Brucella abortus
        32
        3273388
        3109
        52
        ES-0013a
        Brucella abortus
        30
        3262681
        3096
        54
        ES-0013b
        Brucella abortus
        31
        3262117
        3095
        54
        ES-0013c
        Brucella abortus
        31
        3261230
        3094
        54
        ES-0014a
        Brucella abortus
        29
        3262007
        3098
        54
        ES-0014b
        Brucella abortus
        30
        3262022
        3099
        54
        ES-0014c
        Brucella abortus
        29
        3262374
        3097
        54
        ES-0015a
        Brucella abortus
        33
        3269897
        3112
        54
        ES-0015b
        Brucella abortus
        30
        3262927
        3110
        54
        ES-0015c
        Brucella abortus
        37
        3262992
        3104
        54
        ES-0016a
        Brucella abortus
        31
        3269880
        3108
        52
        ES-0016b
        Brucella abortus
        27
        3269617
        3105
        52
        ES-0016c
        Brucella abortus
        30
        3269690
        3108
        52
        ES-0017a
        Brucella abortus
        30
        3269288
        3123
        54
        ES-0017b
        Brucella abortus
        25
        3265539
        3122
        54
        ES-0017c
        Brucella abortus
        81
        3278938
        3120
        54
        ES-0018a
        Brucella inopinata
        56
        3389285
        3160
        58
        ES-0018b
        Brucella inopinata
        59
        3387800
        3153
        58
        ES-0018c
        Brucella inopinata
        61
        3387099
        3153
        58
        ES-0019a
        Brucella inopinata-like
        506
        3299856
        3268
        50
        ES-0019b
        Brucella inopinata-like
        32
        3329174
        3089
        55
        ES-0019c
        Brucella inopinata-like
        42
        3330231
        3084
        55
        ES-0020a
        Brucella melitensis
        40
        3304336
        3152
        53
        ES-0020b
        Brucella melitensis
        27
        3282398
        3125
        53
        ES-0020c
        Brucella melitensis
        27
        3281511
        3128
        53
        ES-0021a
        Brucella microti
        37
        3319599
        3072
        54
        ES-0021b
        Brucella microti
        37
        3319328
        3070
        54
        ES-0021c
        Brucella microti
        40
        3319339
        3069
        54
        ES-0022a
        Brucella neotomae
        30
        3316150
        3135
        53
        ES-0022b
        Brucella neotomae
        27
        3312845
        3135
        53
        ES-0022c
        Brucella neotomae
        32
        3312722
        3129
        53
        ES-0023a
        Brucella pyxicephali
        50
        3358306
        3103
        58
        ES-0023b
        Brucella pyxicephali
        64
        3354892
        3095
        58
        ES-0023c
        Brucella pyxicephali
        49
        3353900
        3092
        58
        ES-0024a
        Brucella ceti
        103
        3315551
        3104
        53
        ES-0024b
        Brucella ceti
        161
        3300416
        3099
        53
        ES-0024c
        Brucella ceti
        96
        3307979
        3088
        53
        ES-0025a
        Brucella suis
        29
        3281646
        3082
        54
        ES-0025b
        Brucella suis
        40
        3281065
        3080
        54
        ES-0025c
        Brucella suis
        33
        3278294
        3074
        54
        ES-0026a
        Brucella papionis
        46
        3347862
        3149
        54
        ES-0026b
        Brucella papionis
        50
        3343044
        3141
        54
        ES-0026c
        Brucella papionis
        49
        3341770
        3134
        54
        ES-0027a
        Brucella rodentia
        59
        3136342
        2927
        54
        ES-0027b
        Brucella rodentia
        62
        3144989
        2936
        54
        ES-0027c
        Brucella rodentia
        60
        3135011
        2919
        54
        ES-0028a
        Brucella ceti
        73
        3316745
        3083
        53
        ES-0028b
        Brucella ceti
        78
        3320868
        3083
        53
        ES-0028c
        Brucella ceti
        75
        3317824
        3074
        53
        ES-0132a
        Brucella pinnipedialis
        69
        3367472
        3141
        54
        ES-0132b
        Brucella pinnipedialis
        66
        3368212
        3146
        54
        ES-0133a
        Brucella microti
        38
        3319792
        3072
        54
        ES-0133b
        Brucella vulpis
        185
        3150070
        3056
        52
        ES-0133c
        Brucella microti
        36
        3320023
        3074
        54

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